Payroll Deductions
Definition, rules and examples

Payroll deductions are amounts an employer withholds from an employee’s gross pay, such as taxes, benefit contributions, and court-ordered garnishments. What is left after deductions is the employee’s net pay.
Team reviewing workforce guides on a laptop

Definition: Payroll deductions are amounts subtracted from an employee's gross pay each pay period. They include legally required withholdings (such as income, Social Security, and Medicare taxes), court-ordered withholdings (such as garnishments), and voluntary deductions the employee authorizes (such as benefit premiums or retirement contributions).

Every paycheck is a calculation: gross pay minus deductions equals net pay. Deductions are where tax rules, benefit elections, court orders, and wage laws meet. A mistake in any of them can mean an under-withheld tax liability, an over-garnished employee, or a deduction that is not allowed at all.

Types of payroll deductions

CategoryExamplesWho decides
Federal tax withholdingFederal income tax, Social Security, Medicare, Additional Medicare TaxFederal law; income tax based on employee's Form W-4
State and local taxesState income tax, local income tax, certain state programsState and local law
Court-orderedWage garnishments, child support orders, tax leviesCourt or agency order
VoluntaryHealth, dental, and vision premiums; retirement contributions; union duesEmployee election or agreement
Employer-requestedUniforms, equipment, advances, overpayment recoveryRestricted by federal and state wage laws

How payroll deductions work

Each pay period, payroll starts with gross pay, applies any pre-tax deductions the employee elected, calculates taxes on the applicable wages, and then applies post-tax deductions and garnishments. The order matters, because some deductions reduce taxable wages and garnishment limits are based on disposable earnings.

Worked example: tax withholding

An employee earns $900.00 gross for a weekly pay period. Using the IRS rates in Tax Topic 751:

  • Social Security: $900.00 x 6.2% = $54.00
  • Medicare: $900.00 x 1.45% = $13.05
  • The employer also pays a matching $54.00 and $13.05 from its own funds; those amounts do not reduce the employee's pay.

Federal income tax withholding is calculated separately using the employee's Form W-4 and IRS withholding methods.

Worked example: garnishment limit

The Department of Labor's Fact Sheet #30 defines disposable earnings as "the amount of earnings left after legally required deductions are made." For ordinary garnishments, the weekly maximum is the lesser of 25% of disposable earnings or the amount by which disposable earnings exceed 30 times the federal minimum wage ($7.25 x 30 = $217.50).

Weekly disposable earnings25% of disposableAmount over $217.50Maximum garnishment
$200.00$50.00$0.00$0.00
$250.00$62.50$32.50$32.50
$400.00$100.00$182.50$100.00

Fact Sheet #30 also explains that voluntary deductions, such as union dues or health insurance, generally cannot be subtracted when calculating disposable earnings, and that up to 50% or 60% of disposable earnings may be garnished for child support or alimony, with an additional 5% for support more than 12 weeks overdue. Where state law differs, the law resulting in the smaller garnishment applies.

Federal rules to know

  • Social Security and Medicare: 6.2% and 1.45% for the employee, matched by the employer. The IRS says the 2026 Social Security wage base is $184,500, and Additional Medicare Tax of 0.9% applies to wages above $200,000 in a calendar year, without an employer match.
  • Federal income tax: Withheld based on the employee's Form W-4.
  • FUTA: The IRS's employment taxes overview states that employees do not pay FUTA tax or have it withheld.
  • Deposits and returns: The same IRS page says federal tax deposits must be made by electronic funds transfer, and employers file returns such as Forms 941, 940, and 944, plus Forms W-2 and W-3 each year.
  • Records: The Department of Labor's recordkeeping fact sheet lists "additions to and deductions from wages" as a required record.

Best practices

  • Get written authorization for every voluntary deduction, and keep it on file.
  • Calculate garnishments on disposable earnings, not gross pay, and apply the correct limit type.
  • Review employer-requested deductions such as uniforms or equipment against minimum wage and overtime rules and your state's deduction laws before taking them.
  • Update deductions promptly when an employee changes benefits, submits a new W-4, or a garnishment ends.
  • Show each deduction separately on pay statements.

Common mistakes

  • Continuing Social Security withholding after the employee reaches the wage base.
  • Including voluntary deductions when calculating disposable earnings for a garnishment.
  • Deducting cash register shortages or damaged equipment in ways that state law does not allow.
  • Applying a deduction to the wrong pay period after a benefits change.
  • Withholding from the employer's share instead of the employee's share, or the reverse.

Pre-tax vs. post-tax deductions

Deductions are often described as pre-tax or post-tax. A pre-tax deduction is taken before certain taxes are calculated, which can lower the employee's taxable wages. A post-tax deduction is taken after taxes are calculated and does not change taxable wages. Whether a specific benefit is pre-tax, and which taxes it affects, depends on the type of plan and how it is set up, so confirm the treatment with your benefits provider or tax advisor rather than assuming.

For payroll teams, the practical point is order of operations. Pre-tax items come off first, then taxes are calculated on the remaining applicable wages, then post-tax items and garnishments are applied. Because garnishment limits are based on disposable earnings after legally required deductions, applying deductions in the wrong order can lead to over- or under-withholding.

Deduction checklist for each pay period

  • Have all new Form W-4 and state withholding forms been entered?
  • Have any benefit elections started, changed, or ended?
  • Are any new garnishment orders, or releases of old ones, on file?
  • Has anyone reached the annual Social Security wage base?
  • Are employer-requested deductions authorized and allowed under state law?

How EZTime helps

Deductions are only as accurate as the gross pay they come from. EZTime captures hours with a GPS mobile time clock with geofencing, NFC tags, a tablet kiosk, or biometric clocks, flags issues with overtime and break alerts, and records every timecard correction in an audit trail. PTO and absence management keeps leave hours clean, and digital HR forms help you collect onboarding documents. Payroll-ready Excel and PDF exports go to any payroll software, which calculates taxes and deductions; EZTime does not run payroll. Plans start at $2 per employee per month with a 14-day trial. Visit the attendance clock page or see pricing.

This is general information, not legal or tax advice.

Frequently asked questions

Mandatory deductions are required by law. They typically include federal income tax withholding, the employee’s share of Social Security and Medicare taxes, state and local income taxes where they apply, and court-ordered garnishments.

According to the IRS, the employee share is 6.2% for Social Security and 1.45% for Medicare. Employers also withhold an additional 0.9% Medicare tax on wages over $200,000 in a calendar year.

For ordinary garnishments, federal law limits the weekly amount to the lesser of 25% of disposable earnings or the amount by which disposable earnings exceed 30 times the federal minimum wage. Different limits apply to child support, bankruptcy, and tax debts.

No. The IRS states that FUTA tax is paid only from the employer’s own funds and is not withheld from employees’ pay.

Track time the right way

Join more than 10,000 businesses that manage their teams with EZTime. 14-day trial, no credit card required.